STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ90909.1PFAM: protein of unknown function DUF86. (116 aa)    
Predicted Functional Partners:
ABQ90908.1
PFAM: DNA polymerase, beta domain protein region.
 
    0.952
ABQ91914.1
PFAM: DNA polymerase, beta domain protein region.
 
    0.803
ABQ88708.1
PFAM: DNA polymerase, beta domain protein region.
 
    0.801
ABQ88969.1
PFAM: DNA polymerase, beta domain protein region.
 
    0.799
ABQ90906.1
PFAM: DNA polymerase, beta domain protein region.
 
    0.798
ABQ91815.1
PFAM: DNA polymerase, beta domain protein region.
 
    0.797
ABQ89309.1
PFAM: DNA polymerase, beta domain protein region.
 
    0.794
ABQ89257.1
PFAM: DNA polymerase, beta domain protein region.
 
    0.632
ABQ90907.1
Hypothetical protein.
       0.610
ABQ90830.1
PFAM: DNA polymerase, beta domain protein region.
 
    0.578
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.