STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ90982.1Hypothetical protein. (543 aa)    
Predicted Functional Partners:
ABQ91337.1
Hypothetical protein.
  
     0.764
ABQ92742.1
PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
  
     0.756
ABQ92275.1
PFAM: band 7 protein.
  
     0.755
ABQ91709.1
PFAM: TadE family protein.
 
     0.743
ABQ90736.1
Hypothetical protein.
  
     0.740
ABQ89477.1
TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; Cna B domain protein.
 
     0.736
ABQ90587.1
Hypothetical protein.
  
   
 0.732
ABQ92552.1
Hypothetical protein.
  
     0.726
ABQ91606.1
Hypothetical protein.
  
     0.723
ABQ91605.1
SMART: Parallel beta-helix repeat.
  
     0.716
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.