STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ91112.1PFAM: protein of unknown function DUF820. (204 aa)    
Predicted Functional Partners:
ABQ91111.1
Membrane protein-like protein.
       0.773
ABQ91110.1
PFAM: beta-lactamase domain protein.
       0.762
ABQ91113.1
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
       0.682
ABQ91114.1
Agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase; Belongs to the agmatine deiminase family.
       0.672
ABQ90882.1
PFAM: protein of unknown function DUF820.
  
     0.666
ABQ91304.1
PFAM: protein of unknown function DUF820.
  
     0.645
ABQ89812.1
PFAM: protein of unknown function DUF820.
  
     0.642
ABQ91305.1
PFAM: protein of unknown function DUF820.
  
     0.639
ABQ89813.1
PFAM: protein of unknown function DUF820.
  
     0.635
ABQ90103.1
PFAM: protein of unknown function DUF820.
  
     0.541
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.