Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABQ90008.1 | ABQ91193.1 | RoseRS_1616 | RoseRS_2822 | Hypothetical protein. | FHA domain containing protein; PFAM: Forkhead-associated protein. | 0.570 |
ABQ90008.1 | ABQ91375.1 | RoseRS_1616 | RoseRS_3011 | Hypothetical protein. | PFAM: von Willebrand factor, type A. | 0.685 |
ABQ90008.1 | ABQ91475.1 | RoseRS_1616 | RoseRS_3112 | Hypothetical protein. | TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; Proprotein convertase, P. | 0.448 |
ABQ90008.1 | ABQ92742.1 | RoseRS_1616 | RoseRS_4409 | Hypothetical protein. | PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein. | 0.774 |
ABQ91005.1 | ABQ91193.1 | RoseRS_2631 | RoseRS_2822 | PFAM: protein of unknown function RIO1; protein kinase; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase. | FHA domain containing protein; PFAM: Forkhead-associated protein. | 0.857 |
ABQ91005.1 | ABQ92290.1 | RoseRS_2631 | RoseRS_3938 | PFAM: protein of unknown function RIO1; protein kinase; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase. | FHA domain containing protein; PFAM: Forkhead-associated protein. | 0.914 |
ABQ91192.1 | ABQ91193.1 | RoseRS_2821 | RoseRS_2822 | TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; Belongs to the ParB family. | FHA domain containing protein; PFAM: Forkhead-associated protein. | 0.518 |
ABQ91192.1 | ABQ91194.1 | RoseRS_2821 | RoseRS_2823 | TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; Belongs to the ParB family. | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | 0.518 |
ABQ91193.1 | ABQ90008.1 | RoseRS_2822 | RoseRS_1616 | FHA domain containing protein; PFAM: Forkhead-associated protein. | Hypothetical protein. | 0.570 |
ABQ91193.1 | ABQ91005.1 | RoseRS_2822 | RoseRS_2631 | FHA domain containing protein; PFAM: Forkhead-associated protein. | PFAM: protein of unknown function RIO1; protein kinase; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase. | 0.857 |
ABQ91193.1 | ABQ91192.1 | RoseRS_2822 | RoseRS_2821 | FHA domain containing protein; PFAM: Forkhead-associated protein. | TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; Belongs to the ParB family. | 0.518 |
ABQ91193.1 | ABQ91194.1 | RoseRS_2822 | RoseRS_2823 | FHA domain containing protein; PFAM: Forkhead-associated protein. | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | 0.774 |
ABQ91193.1 | ABQ91349.1 | RoseRS_2822 | RoseRS_2985 | FHA domain containing protein; PFAM: Forkhead-associated protein. | PFAM: glutamine amidotransferase, class-II; glutamate synthase, alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase. | 0.567 |
ABQ91193.1 | ABQ91375.1 | RoseRS_2822 | RoseRS_3011 | FHA domain containing protein; PFAM: Forkhead-associated protein. | PFAM: von Willebrand factor, type A. | 0.476 |
ABQ91193.1 | ABQ91475.1 | RoseRS_2822 | RoseRS_3112 | FHA domain containing protein; PFAM: Forkhead-associated protein. | TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; Proprotein convertase, P. | 0.511 |
ABQ91193.1 | ABQ91754.1 | RoseRS_2822 | RoseRS_3396 | FHA domain containing protein; PFAM: Forkhead-associated protein. | TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase, E1 component; Transketolase, central region. | 0.510 |
ABQ91193.1 | ABQ92290.1 | RoseRS_2822 | RoseRS_3938 | FHA domain containing protein; PFAM: Forkhead-associated protein. | FHA domain containing protein; PFAM: Forkhead-associated protein. | 0.500 |
ABQ91193.1 | ABQ92742.1 | RoseRS_2822 | RoseRS_4409 | FHA domain containing protein; PFAM: Forkhead-associated protein. | PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein. | 0.494 |
ABQ91194.1 | ABQ91192.1 | RoseRS_2823 | RoseRS_2821 | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; Belongs to the ParB family. | 0.518 |
ABQ91194.1 | ABQ91193.1 | RoseRS_2823 | RoseRS_2822 | Protoporphyrin IX magnesium-chelatase; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. | FHA domain containing protein; PFAM: Forkhead-associated protein. | 0.774 |
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