STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ91198.1PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin. (999 aa)    
Predicted Functional Partners:
ABQ91375.1
PFAM: von Willebrand factor, type A.
 
 
 0.616
ABQ92130.1
PFAM: peptidase S1 and S6, chymotrypsin/Hap.
 
 0.563
ABQ90818.1
Hypothetical protein.
  
 0.540
ABQ91199.1
Hypothetical protein.
       0.497
ABQ88504.1
Hypothetical protein.
  
  
 0.465
ABQ91200.1
PFAM: phospholipid/glycerol acyltransferase.
  
   0.459
ABQ88495.1
PFAM: peptidase M23B.
  
    0.448
ABQ91372.1
Peptidase M23B; PFAM: von Willebrand factor, type A; peptidase M23B.
  
    0.439
ABQ89907.1
Protease-associated PA domain protein; PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; protease-associated PA domain protein.
  
     0.417
ABQ91514.1
PFAM: Allergen V5/Tpx-1 family protein.
  
     0.410
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.