STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ91217.1PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain. (349 aa)    
Predicted Functional Partners:
ABQ91215.1
Polynucleotide adenylyltransferase region; PFAM: CBS domain containing protein; phosphoesterase, RecJ domain protein; Polynucleotide adenylyltransferase region; phosphoesterase, DHHA1; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
  
 0.855
ABQ90028.1
PFAM: oxidoreductase domain protein.
  
     0.774
ABQ92737.1
PFAM: Xylose isomerase domain protein TIM barrel.
 
    0.774
ABQ91216.1
Hypothetical protein.
       0.773
ABQ88931.1
PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain.
  
     0.771
ABQ90569.1
PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain.
  
     0.771
ABQ88574.1
PFAM: Xylose isomerase domain protein TIM barrel.
 
    0.757
ABQ91972.1
PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain.
  
     0.755
ABQ88923.1
PFAM: Myo-inositol catabolism IolB domain protein.
 
  
 0.721
ABQ89493.1
PFAM: Xylose isomerase domain protein TIM barrel.
 
    0.650
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.