STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ91264.1PFAM: extracellular solute-binding protein, family 1. (452 aa)    
Predicted Functional Partners:
ABQ91263.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.878
ABQ91262.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.872
ABQ88949.1
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase.
  
 
 0.679
ABQ91976.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.679
ABQ91190.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.650
ABQ89757.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.634
ABQ92591.1
PFAM: extracellular solute-binding protein, family 1.
  
     0.626
ABQ90692.1
PFAM: extracellular solute-binding protein, family 1.
  
     0.621
ABQ91975.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.613
ABQ91191.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.606
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.