STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ91432.1PFAM: ABC transporter related; SMART: AAA ATPase. (262 aa)    
Predicted Functional Partners:
ABQ91430.1
PFAM: ABC-3 protein.
 
 0.998
ABQ91431.1
PFAM: ABC-3 protein.
 
 0.998
ABQ91433.1
PFAM: periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.997
ABQ89661.1
ABC-3 protein; PFAM: transport system permease protein; ABC-3 protein.
 
 
 0.963
ABQ89663.1
PFAM: periplasmic solute binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.952
ABQ89021.1
Hypothetical protein.
  
 
 0.843
ABQ89015.1
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; Belongs to the Fur family.
  
  
 0.483
ABQ89697.1
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; Belongs to the Fur family.
  
  
 0.483
ABQ88972.1
FeoA family protein; PFAM: iron dependent repressor; FeoA family protein.
  
  
 0.415
ABQ92333.1
FeoA family protein; PFAM: iron dependent repressor; FeoA family protein.
  
  
 0.415
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.