STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ91568.1Peptidase S41; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41. (692 aa)    
Predicted Functional Partners:
ABQ89194.1
PFAM: glycosyl transferase, family 39.
  
     0.703
ABQ89104.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: RNA-processing protein, HAT helix repeating-containing protein; Tetratricopeptide domain protein.
 
 
 0.694
ABQ90618.1
Hypothetical protein.
  
     0.661
ABQ90008.1
Hypothetical protein.
  
     0.650
ABQ90587.1
Hypothetical protein.
 
 
   0.644
ABQ92174.1
Hypothetical protein.
  
 
   0.613
ABQ92803.1
Hypothetical protein.
  
     0.613
ABQ91240.1
PFAM: metallophosphoesterase.
  
 
   0.610
ABQ92742.1
PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
  
 
   0.595
ABQ91709.1
PFAM: TadE family protein.
 
     0.594
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
Server load: low (18%) [HD]