STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ91570.1PFAM: ABC transporter related; SMART: AAA ATPase. (337 aa)    
Predicted Functional Partners:
ABQ91569.1
ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein.
 
 
 0.978
ABQ90856.1
PFAM: ABC-2 type transporter.
  
 0.936
ABQ91571.1
PFAM: protein of unknown function DUF11.
 
    0.909
ABQ90808.1
PFAM: ABC transporter related; SMART: AAA ATPase.
   
0.806
ABQ91640.1
Hypothetical protein.
  
 
 0.535
ABQ90795.1
Hypothetical protein.
  
 
 0.506
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
 
 0.449
ABQ91568.1
Peptidase S41; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41.
       0.439
ABQ90854.1
PFAM: ABC-2 type transporter.
 
  
 0.434
ABQ92095.1
PFAM: ABC-2 type transporter.
 
  
 0.433
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.