STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ91701.1PFAM: sulfatase. (540 aa)    
Predicted Functional Partners:
ABQ91698.1
PFAM: type I phosphodiesterase/nucleotide pyrophosphatase.
 
     0.898
lgt-2
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.
 
     0.828
ABQ91287.1
PFAM: protein of unknown function DUF323.
 
   0.767
ABQ91750.1
PFAM: Radical SAM domain protein.
 
 
 0.752
cysC
Sulfate adenylyltransferase / adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
 
   
 0.731
ABQ88890.1
PFAM: type I phosphodiesterase/nucleotide pyrophosphatase.
 
     0.715
ABQ91168.1
PFAM: protein of unknown function DUF820.
  
     0.675
ABQ92759.1
PFAM: protein of unknown function DUF820.
  
     0.666
ABQ89144.1
PFAM: protein of unknown function DUF820.
  
     0.665
ABQ88895.1
PFAM: type I phosphodiesterase/nucleotide pyrophosphatase.
 
     0.644
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.