STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ91736.1PFAM: Leucine zipper, homeobox-associated domain protein. (950 aa)    
Predicted Functional Partners:
ABQ88746.1
Hypothetical protein.
   
 0.949
ABQ89808.1
Hypothetical protein.
   
 0.949
ABQ91034.1
Hypothetical protein.
   
 0.949
ABQ92366.1
Hypothetical protein.
    
 0.843
ABQ91738.1
Protein kinase; PFAM: Forkhead-associated protein; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase.
  
 
 0.836
ABQ90810.1
PFAM: TPR repeat-containing protein; heat shock protein DnaJ domain protein; Tetratricopeptide TPR_2 repeat protein.
   
 0.815
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 0.815
ABQ91737.1
PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein.
  
 
 0.813
ABQ89974.1
Exonuclease of the beta-lactamase fold involved in RNA processing-like protein.
   
 0.809
ABQ88730.1
PFAM: helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like.
  
 0.802
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.