STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ91812.1PFAM: oxidoreductase domain protein; homoserine dehydrogenase, NAD-binding. (373 aa)    
Predicted Functional Partners:
ABQ91811.1
Conserved hypothetical protein.
 
     0.953
ABQ88574.1
PFAM: Xylose isomerase domain protein TIM barrel.
 
    0.817
ABQ91813.1
PFAM: PfkB domain protein.
  
    0.813
ABQ92737.1
PFAM: Xylose isomerase domain protein TIM barrel.
 
    0.808
ABQ92679.1
PFAM: protein of unknown function DUF1037.
 
    0.776
ABQ89930.1
PFAM: Xylose isomerase domain protein TIM barrel.
 
    0.770
ABQ88923.1
PFAM: Myo-inositol catabolism IolB domain protein.
 
  
 0.734
ABQ91259.1
PFAM: glycoside hydrolase, family 4.
  
     0.643
ABQ91056.1
PFAM: Xylose isomerase domain protein TIM barrel.
 
    0.581
ABQ89493.1
PFAM: Xylose isomerase domain protein TIM barrel.
 
    0.536
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.