STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ91838.1PFAM: glycoside hydrolase, family 3 domain protein; PA14 domain protein; SMART: PA14-related domain protein; Belongs to the glycosyl hydrolase 3 family. (915 aa)    
Predicted Functional Partners:
ABQ91969.1
PFAM: glycoside hydrolase, family 1.
 
  
 0.930
ABQ91331.1
PFAM: glycoside hydrolase, family 1; Belongs to the glycosyl hydrolase 1 family.
 
  
 0.929
ABQ91671.1
PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain.
  
 
 0.922
ABQ90320.1
PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain.
   
 
 0.912
ABQ92457.1
PFAM: glycoside hydrolase, family 4.
     
 0.906
ABQ89968.1
Beta-mannosidase; PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, sugar binding.
 
   
 0.769
ABQ91872.1
Alpha-N-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein.
 
   
 0.732
ABQ90130.1
PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding.
 
   
 0.724
ABQ91087.1
PFAM: glycoside hydrolase, family 42, domain 5, loop region; glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding.
 
   
 0.607
ABQ89400.1
PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, sugar binding.
 
   
 0.580
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.