STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ91854.1FHA domain containing protein; PFAM: Forkhead-associated protein. (283 aa)    
Predicted Functional Partners:
ABQ91005.1
PFAM: protein of unknown function RIO1; protein kinase; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase.
   
 
 0.857
ABQ91853.1
PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase.
 
     0.842
ABQ91855.1
SMART: von Willebrand factor, type A.
       0.819
ABQ91856.1
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase.
   
   0.805
ABQ88746.1
Hypothetical protein.
  
  0.790
ABQ91857.1
PFAM: protein phosphatase 2C domain protein; PASTA domain containing protein; Stage II sporulation E family protein.
 
   0.761
ABQ89104.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: RNA-processing protein, HAT helix repeating-containing protein; Tetratricopeptide domain protein.
 
 
 0.753
ABQ92742.1
PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
  
   0.751
ABQ92275.1
PFAM: band 7 protein.
  
     0.732
ABQ88586.1
SMART: Tetratricopeptide domain protein.
  
     0.724
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.