STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ91903.1PFAM: protein of unknown function DUF1680. (663 aa)    
Predicted Functional Partners:
ABQ91185.1
Alpha-L-fucosidase; PFAM: glycoside hydrolase, family 29 (alpha-L-fucosidase).
  
     0.689
ABQ92295.1
Alpha-L-fucosidase; PFAM: glycoside hydrolase, family 29 (alpha-L-fucosidase).
  
     0.685
ABQ91204.1
Hypothetical protein.
  
     0.674
ABQ91107.1
PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase N-terminal domain protein.
  
     0.621
ABQ89400.1
PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, sugar binding.
 
     0.530
ABQ89832.1
Alpha-mannosidase; PFAM: glycoside hydrolase, family 38; glycosyl hydrolase 38 domain protein.
 
     0.528
ABQ89810.1
PFAM: aldo/keto reductase.
  
     0.519
ABQ90194.1
Hypothetical protein.
 
     0.509
ABQ91904.1
Hypothetical protein.
 
     0.499
ABQ89760.1
PFAM: glycoside hydrolase, clan GH-D.
 
     0.493
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.