STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ91938.1PFAM: conserved hypothetical protein 374. (378 aa)    
Predicted Functional Partners:
ABQ91936.1
PFAM: O-antigen polymerase.
 
     0.870
ABQ91940.1
Hypothetical protein.
 
    0.836
ABQ91939.1
PFAM: glycosyl transferase, group 1.
 
    0.822
ABQ91937.1
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain.
       0.814
ABQ89716.1
AAA-4 family protein; PFAM: PHP C-terminal domain protein; AAA-4 family protein; SMART: phosphoesterase PHP domain protein.
 
     0.704
ABQ88679.1
PFAM: glycosyl transferase, family 39.
  
     0.700
ABQ89553.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
 
     0.696
ABQ90268.1
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
  
     0.694
ABQ89521.1
Hypothetical protein.
  
     0.679
ABQ92460.1
PFAM: Allergen V5/Tpx-1 family protein.
  
     0.674
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.