STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ92199.1PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase. (531 aa)    
Predicted Functional Partners:
ABQ92878.1
PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein.
   0.836
ABQ91137.1
PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein.
   0.824
ABQ91138.1
PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein.
 
   0.824
ABQ89860.1
PFAM: protein phosphatase 2C domain protein.
   0.823
ABQ91737.1
PFAM: protein phosphatase 2C domain protein; Stage II sporulation E family protein.
 
   0.823
ABQ91857.1
PFAM: protein phosphatase 2C domain protein; PASTA domain containing protein; Stage II sporulation E family protein.
 
   0.821
ABQ92198.1
PFAM: cell cycle protein; Belongs to the SEDS family.
 
 
   0.815
ABQ90213.1
PFAM: Forkhead-associated protein; XYPPX repeat-containing protein.
  
 
   0.637
ABQ90171.1
FHA domain containing protein; PFAM: Forkhead-associated protein.
  
 
   0.626
ABQ92200.1
PFAM: DNA polymerase, beta domain protein region.
       0.537
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.