STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ92208.1PFAM: band 7 protein. (366 aa)    
Predicted Functional Partners:
ABQ90237.1
PFAM: peptidase M41; AAA ATPase, central domain protein; SMART: AAA ATPase; Belongs to the AAA ATPase family.
  
 0.836
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins.
   
 0.795
ABQ91118.1
Hypothetical protein.
 
    0.778
ABQ91862.1
PFAM: Allergen V5/Tpx-1 family protein.
  
    0.778
ABQ92209.1
Hypothetical protein.
       0.773
ABQ91000.1
PFAM: cyclic nucleotide-binding; peptidase M50.
  
 
   0.772
ABQ92640.1
Hypothetical protein.
  
     0.770
ABQ91801.1
PFAM: metallophosphoesterase.
  
     0.769
ABQ89811.1
Hypothetical protein.
  
     0.768
ABQ91174.1
Chromosome segregation ATPase-like protein.
  
 
 
 0.767
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.