STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ92297.1PFAM: beta-lactamase domain protein; Belongs to the UPF0173 family. (244 aa)    
Predicted Functional Partners:
ABQ92296.1
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding.
       0.707
ABQ92295.1
Alpha-L-fucosidase; PFAM: glycoside hydrolase, family 29 (alpha-L-fucosidase).
       0.578
ABQ92293.1
PFAM: NADP oxidoreductase, coenzyme F420-dependent.
       0.522
ABQ92294.1
PFAM: ATPase, BadF/BadG/BcrA/BcrD type.
       0.521
ABQ92292.1
PFAM: extracellular solute-binding protein, family 1.
       0.512
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.