STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ92304.1PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase, class I and II; Belongs to the DegT/DnrJ/EryC1 family. (397 aa)    
Predicted Functional Partners:
ABQ88833.1
PFAM: sugar transferase.
 
  
 0.816
ABQ91313.1
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase.
 
  
 0.816
ABQ89541.1
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase.
 
  
 0.813
ABQ91934.1
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase.
 
  
 0.813
ABQ92305.1
PFAM: protein of unknown function DUF52.
       0.773
ABQ89542.1
PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain.
  
 0.709
ABQ90003.1
TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.670
ABQ92763.1
PFAM: oxidoreductase domain protein; Oxidoreductase, C-terminal domain.
  
 0.641
ABQ92604.1
PFAM: transferase hexapeptide repeat containing protein.
 
  
 0.618
ABQ90773.1
PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase, NAD-binding; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.606
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.