STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ92306.1PFAM: SH3, type 3 domain protein; SMART: SH3 domain protein domain protein. (270 aa)    
Predicted Functional Partners:
ABQ90014.1
Hypothetical protein.
  
     0.764
ABQ89077.1
Hypothetical protein.
  
     0.755
ABQ89411.1
TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11.
  
     0.748
ABQ92803.1
Hypothetical protein.
  
     0.738
ABQ90741.1
Hypothetical protein.
  
     0.718
ABQ90012.1
Hypothetical protein.
  
     0.681
ABQ88830.1
Hypothetical protein.
  
     0.675
ABQ90041.1
Hypothetical protein.
  
     0.671
ABQ89671.1
Hypothetical protein.
  
     0.669
ABQ92238.1
Hypothetical protein.
  
     0.656
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.