STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ92336.1PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family. (429 aa)    
Predicted Functional Partners:
ABQ92335.1
Hypothetical protein.
       0.814
ABQ89083.1
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family.
  
     0.757
ABQ92334.1
Hypothetical protein.
       0.631
ABQ92130.1
PFAM: peptidase S1 and S6, chymotrypsin/Hap.
 
 0.596
ABQ91375.1
PFAM: von Willebrand factor, type A.
 
 
 0.561
ABQ92337.1
PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; Shikimate/quinate 5-dehydrogenase.
       0.513
ABQ92339.1
Hypothetical protein.
 
     0.510
ABQ88504.1
Hypothetical protein.
  
  
 0.465
ABQ92830.1
PFAM: regulator of chromosome condensation, RCC1.
  
 
 0.435
ABQ88852.1
PFAM: regulator of chromosome condensation, RCC1.
  
 
 0.426
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.