STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ92433.1PFAM: ABC transporter related; Methyltransferase type 11; Methyltransferase type 12; SMART: AAA ATPase. (870 aa)    
Predicted Functional Partners:
ABQ91727.1
PFAM: ABC-2 type transporter.
 
 0.998
ABQ92440.1
PFAM: ABC-2 type transporter.
 
 0.998
ABQ89271.1
PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
0.918
ABQ92432.1
PFAM: glycosyl transferase, family 2; UbiE/COQ5 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12.
 
 
0.895
ABQ92431.1
PFAM: glycosyl transferase, family 2.
 
  
 0.861
ABQ92429.1
PFAM: glycosyl transferase, family 2.
 
  
 0.760
ABQ92430.1
PFAM: Methyltransferase type 11; Methyltransferase type 12.
   
 
 0.702
ABQ91051.1
PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1.
 
 
 0.699
ABQ91728.1
PFAM: glycosyl transferase, family 2; glycosyl transferase, group 1.
 
 
 0.679
ABQ91273.1
PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; XYPPX repeat-containing protein; phosphopantetheine-binding; KR.
  
 
 0.676
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.