STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ92592.1PFAM: binding-protein-dependent transport systems inner membrane component. (332 aa)    
Predicted Functional Partners:
ABQ88949.1
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase.
 
 
 0.975
ABQ92593.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 0.969
ABQ92898.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.893
ABQ89758.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.886
ABQ91191.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.886
ABQ91262.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.886
ABQ91511.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.886
ABQ91975.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 
 0.886
ABQ89215.1
PFAM: binding-protein-dependent transport systems inner membrane component.
 
 0.881
ABQ89163.1
PFAM: extracellular solute-binding protein, family 1.
 
 
 0.852
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.