STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ92777.1PFAM: protein of unknown function DUF820. (298 aa)    
Predicted Functional Partners:
ABQ90929.1
PFAM: protein of unknown function DUF820.
  
     0.774
ABQ88851.1
PFAM: protein of unknown function DUF820.
  
     0.773
ABQ91543.1
PFAM: protein of unknown function DUF820.
  
     0.773
ABQ92778.1
PFAM: glycosyl transferase, group 1.
       0.773
ABQ89327.1
PFAM: protein of unknown function DUF820.
  
     0.771
ABQ90103.1
PFAM: protein of unknown function DUF820.
  
     0.762
ABQ91305.1
PFAM: protein of unknown function DUF820.
  
     0.761
ABQ91297.1
Hypothetical protein.
  
     0.760
ABQ91304.1
PFAM: protein of unknown function DUF820.
  
     0.759
ABQ91014.1
PFAM: protein of unknown function DUF820.
  
     0.754
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.