STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABQ92790.1PFAM: protein of unknown function DUF224, cysteine-rich region domain protein. (247 aa)    
Predicted Functional Partners:
ABQ92791.1
TIGRFAM: iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF162.
 
 0.997
ABQ90941.1
PFAM: protein of unknown function DUF162.
 
 
 0.910
ABQ92792.1
PFAM: glycoside hydrolase, family 57.
       0.674
ABQ89620.1
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
  
 0.538
ABQ90450.1
L-lactate transport; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.514
ABQ91721.1
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein.
 
  
 0.456
ABQ91661.1
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
 
  
 0.451
ABQ92793.1
PFAM: protein of unknown function DUF820.
       0.446
ABQ90004.1
D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein.
 
  
 0.436
ABQ91334.1
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
  
 0.418
Your Current Organism:
Roseiflexus sp. RS1
NCBI taxonomy Id: 357808
Other names: R. sp. RS-1, Roseiflexus sp. RS-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.