STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_0299PFAM: glycosyl transferase family 2; KEGG: lsa:LSA1519 putative teichoic acid/polysaccharide glycosyl transferase, family 2. (342 aa)    
Predicted Functional Partners:
Cphy_2887
PFAM: glycosyl transferase family 2; KEGG: pth:PTH_1466 glycosyltransferases.
  
     0.719
Cphy_0298
KEGG: amt:Amet_0211 hypothetical protein.
  
    0.709
Cphy_0297
PFAM: glycosyl transferase family 2; CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: bld:BLi03816 hypothetical protein.
  
  
 0.702
Cphy_0300
KEGG: lin:lin1076 highly similar to glycerol-3-phosphate cytidylyltransferase (gct), CDP-glycerol pyrophosphorylase (teichoic acid biosynthesis protein D); TIGRFAM: cytidyltransferase-related domain protein; glycerol-3-phosphate cytidylyltransferase; PFAM: cytidylyltransferase.
  
  
 0.661
Cphy_1019
Kojibiose phosphorylase; Phosphorylase showing strict alpha-1,3-regioselectivity and producing 3-O-alpha-D-glucopyranosyl-L-rhamnopyranose. Specific for L- rhamnose as acceptor and beta-D-glucose 1-phosphate as donor. Does not phosphorylate alpha,alpha-trehalose, kojibiose, nigerose, or maltose.
      
 0.587
Cphy_1201
KEGG: spd:SPD_0319 undecaprenylphosphate glucosephosphotransferase Cps2E; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.568
Cphy_3313
Kojibiose phosphorylase; PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: ana:all4989 hypothetical protein.
      
 0.548
Cphy_3542
KEGG: dsy:DSY3322 hypothetical protein; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.546
Cphy_1874
Kojibiose phosphorylase; Catalyzes the reversible phosphorolysis of nigerose. Also shows a weak activity on kojibiose; Belongs to the glycosyl hydrolase 65 family.
      
 0.513
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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