STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_0319PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: spe:Spro_2465 glycerol-3-phosphate responsive antiterminator, GlpP. (192 aa)    
Predicted Functional Partners:
Cphy_3394
PFAM: FAD dependent oxidoreductase; transport-associated; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: tde:TDE0134 oxidoreductase, FAD-dependent.
 
     0.708
Cphy_0321
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ctc:CTC02435 sarcosine oxidase alpha subunit.
 
    0.694
Cphy_0322
PFAM: protein of unknown function DUF1667; KEGG: ctc:CTC02434 hypothetical protein.
 
    0.683
Cphy_0320
PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: ctc:CTC02436 glycerol-3-phosphate dehydrogenase.
 
     0.677
Cphy_3392
PFAM: protein of unknown function DUF1667; KEGG: cac:CAC1324 uncharacterized predected metal-binding protein.
 
    0.675
Cphy_3393
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tde:TDE0135 pyridine nucleotide-disulphide oxidoreductase family protein.
 
    0.667
Cphy_0318
KEGG: sfu:Sfum_0268 amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
       0.642
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
  
  
 0.631
Cphy_0603
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cdf:CD2682 pyruvate-flavodoxin oxidoreductase.
     
 0.592
Cphy_3558
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cno:NT01CX_1854 pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.490
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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