Cphy_0412 protein (Lachnoclostridium phytofermentans)

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Score

Cphy_0412

PFAM: protein of unknown function DUF1385; KEGG: sth:STH72 hypothetical protein. (532 aa)

Predicted Functional Partners:

prmC

0.945

Cphy_3053

0.810

rpmE

0.684

prfA

0.635

rho

0.507

Your Current Organism:

Lachnoclostridium phytofermentans

NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cphy_0412	Cphy_3053	Cphy_0412	Cphy_3053	PFAM: protein of unknown function DUF1385; KEGG: sth:STH72 hypothetical protein.	TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: cpe:CPE0551 probable agmatinase; Belongs to the arginase family.	0.810
Cphy_0412	prfA	Cphy_0412	Cphy_0414	PFAM: protein of unknown function DUF1385; KEGG: sth:STH72 hypothetical protein.	Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.	0.635
Cphy_0412	prmC	Cphy_0412	Cphy_0413	PFAM: protein of unknown function DUF1385; KEGG: sth:STH72 hypothetical protein.	protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.	0.945
Cphy_0412	rho	Cphy_0412	Cphy_0410	PFAM: protein of unknown function DUF1385; KEGG: sth:STH72 hypothetical protein.	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	0.507
Cphy_0412	rpmE	Cphy_0412	Cphy_0411	PFAM: protein of unknown function DUF1385; KEGG: sth:STH72 hypothetical protein.	Ribosomal protein L31; Binds the 23S rRNA.	0.684
Cphy_3053	Cphy_0412	Cphy_3053	Cphy_0412	TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: cpe:CPE0551 probable agmatinase; Belongs to the arginase family.	PFAM: protein of unknown function DUF1385; KEGG: sth:STH72 hypothetical protein.	0.810
prfA	Cphy_0412	Cphy_0414	Cphy_0412	Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.	PFAM: protein of unknown function DUF1385; KEGG: sth:STH72 hypothetical protein.	0.635
prfA	prmC	Cphy_0414	Cphy_0413	Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.	protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.	0.995
prfA	rho	Cphy_0414	Cphy_0410	Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	0.801
prfA	rpmE	Cphy_0414	Cphy_0411	Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.	Ribosomal protein L31; Binds the 23S rRNA.	0.943
prmC	Cphy_0412	Cphy_0413	Cphy_0412	protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.	PFAM: protein of unknown function DUF1385; KEGG: sth:STH72 hypothetical protein.	0.945
prmC	prfA	Cphy_0413	Cphy_0414	protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.	Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.	0.995
prmC	rho	Cphy_0413	Cphy_0410	protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	0.545
prmC	rpmE	Cphy_0413	Cphy_0411	protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.	Ribosomal protein L31; Binds the 23S rRNA.	0.708
rho	Cphy_0412	Cphy_0410	Cphy_0412	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	PFAM: protein of unknown function DUF1385; KEGG: sth:STH72 hypothetical protein.	0.507
rho	prfA	Cphy_0410	Cphy_0414	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.	0.801
rho	prmC	Cphy_0410	Cphy_0413	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.	0.545
rho	rpmE	Cphy_0410	Cphy_0411	Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.	Ribosomal protein L31; Binds the 23S rRNA.	0.846
rpmE	Cphy_0412	Cphy_0411	Cphy_0412	Ribosomal protein L31; Binds the 23S rRNA.	PFAM: protein of unknown function DUF1385; KEGG: sth:STH72 hypothetical protein.	0.684
rpmE	prfA	Cphy_0411	Cphy_0414	Ribosomal protein L31; Binds the 23S rRNA.	Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.	0.943