Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cphy_1164PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cbe:Cbei_3371 short-chain dehydrogenase/reductase SDR. (263 aa)    
Predicted Functional Partners:
Cphy_2202
PFAM: phosphopantetheine-binding; KEGG: ckl:CKL_1730 polyketide synthase-related protein.
  
 
 0.816
Cphy_3029
PFAM: glycosyl hydrolase family 88; KEGG: rle:pRL120662 putative unsaturated glucuronyl hydrolase.
 
   
 0.629
Cphy_0934
PFAM: glycosyl hydrolase family 88; KEGG: rle:pRL120662 putative unsaturated glucuronyl hydrolase.
 
   
 0.625
Cphy_0288
PFAM: glycosyl hydrolase family 88; KEGG: rle:pRL120662 putative unsaturated glucuronyl hydrolase.
 
   
 0.620
Cphy_0491
PFAM: Ribose/galactose isomerase; KEGG: cbe:Cbei_3370 ribose/galactose isomerase.
 
   
 0.560
Cphy_2387
PFAM: Ribose/galactose isomerase; KEGG: cac:CAC2606 hypothetical protein.
 
   
 0.554
Cphy_0776
PFAM: glycosyl hydrolase family 88; KEGG: bcl:ABC3274 unsaturated glucuronyl hydrolase.
 
   
 0.527
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
  
 0.496
Cphy_0516
TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: cth:Cthe_0935 malonyl CoA-acyl carrier protein transacylase.
  
 
 0.489
Cphy_0893
PFAM: Catalase domain protein; KEGG: bce:BC1155 catalase; Belongs to the catalase family.
   
 0.483
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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