STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pduLPropanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. (213 aa)    
Predicted Functional Partners:
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
 0.963
Cphy_1184
PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: lwe:lwe1121 ethanolamine and carbon dioxide metabolism.
 
   
 0.779
Cphy_1185
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: ecw:EcE24377A_2294 propanediol utilization protein PduS.
     
 0.763
Cphy_1178
PFAM: Aldehyde Dehydrogenase_; KEGG: rru:Rru_A0914 aldehyde dehydrogenase.
 
   
 0.739
Cphy_1181
PFAM: microcompartments protein; KEGG: aha:AHA_1336 bacterial microcompartments family protein.
 
  
 0.689
Cphy_1180
PFAM: microcompartments protein; KEGG: spc:Sputcn32_0210 microcompartments protein.
 
  
 0.653
Cphy_1179
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ooe:OEOE_0394 threonine dehydrogenase or related Zn-dependent dehydrogenase.
 
   
 0.642
Cphy_1186
PFAM: microcompartments protein; KEGG: drm:Dred_3269 microcompartments protein.
 
  
 0.616
Cphy_1182
PFAM: microcompartments protein; KEGG: ckl:CKL_1072 predicted microcompartment protein.
 
  
 0.572
cutC
Formate C-acetyltransferase; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily.
     
 0.518
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.