Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_1363PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cac:CAC0822 ABC transporter, ATP-binding protein. (234 aa)    
Predicted Functional Partners:
Cphy_1362
PFAM: protein of unknown function DUF214; KEGG: lmf:LMOf2365_1233 ABC transporter, permease protein.
 
  
 0.959
Cphy_2079
PFAM: protein of unknown function DUF214; KEGG: cth:Cthe_0540 protein of unknown function DUF214.
 
 
 0.914
Cphy_2589
PFAM: protein of unknown function DUF214; KEGG: efa:EF1321 permease domain protein.
 
 
 0.878
Cphy_1244
PFAM: protein of unknown function DUF214; KEGG: cdf:CD2533 ABC transporter, permease protein.
  
   0.526
Cphy_1364
PFAM: regulatory protein TetR; KEGG: cbe:Cbei_3107 transcriptional regulator, TetR family.
   
   0.523
Cphy_2339
PFAM: protein of unknown function DUF214; KEGG: btk:BT9727_3141 ABC transporter, permease.
  
   0.504
Cphy_3331
PFAM: protein of unknown function DUF214; KEGG: csc:Csac_0506 protein of unknown function DUF214.
  
 
 0.447
Cphy_1857
PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: blo:BL1369 large protein with N-terminal similarity to ATP binding protein of ABC transporter.
  
   0.436
Cphy_0192
PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: ppe:PEPE_1650 ABC-type antimicrobial peptide transport system, ATPase component.
  
   0.427
Cphy_1027
PFAM: protein of unknown function DUF214; KEGG: bcz:BCZK2228 ABC transporter, permease.
   
   0.414
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.