STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
Experiments
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[Homology]
Score
cbiMCobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. (250 aa)    
Predicted Functional Partners:
cbiN
Cobalt transport protein CbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
 
 
 0.994
Cphy_1383
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: cbe:Cbei_3712 cobalt ABC transporter, inner membrane subunit CbiQ.
 
 
 0.991
Cphy_1384
ABC transporter related; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
 0.982
Cphy_0691
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: cth:Cthe_1802 cobalt ABC transporter, inner membrane subunit CbiQ.
 
 
 0.972
Cphy_0681
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: cth:Cthe_1803 cobalamin (vitamin B12) biosynthesis CbiM protein.
  
  
 
0.918
Cphy_0692
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cth:Cthe_1801 ABC transporter related protein.
 
 
 0.910
Cphy_1379
TIGRFAM: precorrin-6x reductase; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Precorrin-6x reductase CbiJ/CobK; KEGG: ctc:CTC00734 precorrin-6B methylase/decarboxylase cbiT/cbiE.
  
  
 0.833
Cphy_1377
PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: tde:TDE0615 cobalamin biosynthesis protein CbiG.
 
  
 0.695
Cphy_1375
TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ckl:CKL_0727 CbiL; Belongs to the precorrin methyltransferase family.
 
  
 0.593
Cphy_1387
Anaerobic cobalt chelatase; PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; anaerobic cobalt chelatase; KEGG: cno:NT01CX_0573 anaerobic cobalt chelatase.
  
  
 0.587
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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