Cphy_1451 protein (Lachnoclostridium phytofermentans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Cphy_1451

TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_0315 phosphonate ABC transporter permease protein. (269 aa)

Predicted Functional Partners:

phnC

0.995

Cphy_1448

0.987

Cphy_1450

0.984

Cphy_1452

0.876

Your Current Organism:

Lachnoclostridium phytofermentans

NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cphy_1448	Cphy_1450	Cphy_1448	Cphy_1450	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: llm:llmg_0312 phosphonate ABC transporter, phosphonate-binding protein PhnD.	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_0314 phosphonate transport system permease protein PhnB.	0.985
Cphy_1448	Cphy_1451	Cphy_1448	Cphy_1451	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: llm:llmg_0312 phosphonate ABC transporter, phosphonate-binding protein PhnD.	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_0315 phosphonate ABC transporter permease protein.	0.987
Cphy_1448	Cphy_1452	Cphy_1448	Cphy_1452	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: llm:llmg_0312 phosphonate ABC transporter, phosphonate-binding protein PhnD.	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: bcy:Bcer98_2341 5'-nucleotidase domain protein; Belongs to the 5'-nucleotidase family.	0.843
Cphy_1448	phnC	Cphy_1448	Cphy_1449	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: llm:llmg_0312 phosphonate ABC transporter, phosphonate-binding protein PhnD.	Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.	0.997
Cphy_1450	Cphy_1448	Cphy_1450	Cphy_1448	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_0314 phosphonate transport system permease protein PhnB.	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: llm:llmg_0312 phosphonate ABC transporter, phosphonate-binding protein PhnD.	0.985
Cphy_1450	Cphy_1451	Cphy_1450	Cphy_1451	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_0314 phosphonate transport system permease protein PhnB.	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_0315 phosphonate ABC transporter permease protein.	0.984
Cphy_1450	Cphy_1452	Cphy_1450	Cphy_1452	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_0314 phosphonate transport system permease protein PhnB.	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: bcy:Bcer98_2341 5'-nucleotidase domain protein; Belongs to the 5'-nucleotidase family.	0.864
Cphy_1450	phnC	Cphy_1450	Cphy_1449	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_0314 phosphonate transport system permease protein PhnB.	Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.	0.995
Cphy_1451	Cphy_1448	Cphy_1451	Cphy_1448	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_0315 phosphonate ABC transporter permease protein.	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: llm:llmg_0312 phosphonate ABC transporter, phosphonate-binding protein PhnD.	0.987
Cphy_1451	Cphy_1450	Cphy_1451	Cphy_1450	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_0315 phosphonate ABC transporter permease protein.	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_0314 phosphonate transport system permease protein PhnB.	0.984
Cphy_1451	Cphy_1452	Cphy_1451	Cphy_1452	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_0315 phosphonate ABC transporter permease protein.	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: bcy:Bcer98_2341 5'-nucleotidase domain protein; Belongs to the 5'-nucleotidase family.	0.876
Cphy_1451	phnC	Cphy_1451	Cphy_1449	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_0315 phosphonate ABC transporter permease protein.	Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.	0.995
Cphy_1452	Cphy_1448	Cphy_1452	Cphy_1448	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: bcy:Bcer98_2341 5'-nucleotidase domain protein; Belongs to the 5'-nucleotidase family.	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: llm:llmg_0312 phosphonate ABC transporter, phosphonate-binding protein PhnD.	0.843
Cphy_1452	Cphy_1450	Cphy_1452	Cphy_1450	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: bcy:Bcer98_2341 5'-nucleotidase domain protein; Belongs to the 5'-nucleotidase family.	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_0314 phosphonate transport system permease protein PhnB.	0.864
Cphy_1452	Cphy_1451	Cphy_1452	Cphy_1451	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: bcy:Bcer98_2341 5'-nucleotidase domain protein; Belongs to the 5'-nucleotidase family.	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_0315 phosphonate ABC transporter permease protein.	0.876
Cphy_1452	phnC	Cphy_1452	Cphy_1449	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: bcy:Bcer98_2341 5'-nucleotidase domain protein; Belongs to the 5'-nucleotidase family.	Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.	0.865
phnC	Cphy_1448	Cphy_1449	Cphy_1448	Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.	TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: llm:llmg_0312 phosphonate ABC transporter, phosphonate-binding protein PhnD.	0.997
phnC	Cphy_1450	Cphy_1449	Cphy_1450	Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_0314 phosphonate transport system permease protein PhnB.	0.995
phnC	Cphy_1451	Cphy_1449	Cphy_1451	Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.	TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: llm:llmg_0315 phosphonate ABC transporter permease protein.	0.995
phnC	Cphy_1452	Cphy_1449	Cphy_1452	Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: bcy:Bcer98_2341 5'-nucleotidase domain protein; Belongs to the 5'-nucleotidase family.	0.865

Server load: low (24%) [HD]

Permalink

Network

Neighborhood

Databases

Cooccurrence

Textmining

Coexpression

Experiments

Fusion

© STRING Consortium 2026

Credits

Access

Info

About