STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_1526PFAM: GCN5-related N-acetyltransferase; KEGG: rca:Rcas_2701 GCN5-related N-acetyltransferase. (98 aa)    
Predicted Functional Partners:
Cphy_1525
Hypothetical protein.
      0.957
Cphy_1872
Putative homoserine kinase type II (protein kinase fold)-like protein; KEGG: btk:BT9727_0548 hypothetical protein.
 
     0.645
Cphy_1663
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bld:BLi04061 YwbC.
 
    0.552
Cphy_2162
PFAM: GCN5-related N-acetyltransferase; KEGG: lic:LIC12825 hypothetical protein.
  
    0.551
Cphy_0265
KEGG: sbl:Sbal_2840 hypothetical protein.
 
     0.550
Cphy_3779
KEGG: tde:TDE0486 membrane protein, putative.
  
     0.548
Cphy_2553
KEGG: mac:MA2899 hypothetical protein.
 
     0.536
Cphy_2039
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; KEGG: dsy:DSY0175 hypothetical protein.
 
     0.527
Cphy_2216
KEGG: bat:BAS2739 hypothetical protein.
  
    0.508
Cphy_2674
KEGG: tde:TDE0486 membrane protein, putative.
  
     0.491
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.