Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cphy_0208 | Cphy_1613 | Cphy_0208 | Cphy_1613 | PFAM: heat shock protein DnaJ domain protein; KEGG: cbf:CLI_0254 molecular chaperone, DnaJ family. | PFAM: regulatory protein MerR; KEGG: amt:Amet_0478 putative transcriptional regulator, MerR family. | 0.457 |
Cphy_0628 | Cphy_1613 | Cphy_0628 | Cphy_1613 | KEGG: csc:Csac_1211 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp. | PFAM: regulatory protein MerR; KEGG: amt:Amet_0478 putative transcriptional regulator, MerR family. | 0.440 |
Cphy_1613 | Cphy_0208 | Cphy_1613 | Cphy_0208 | PFAM: regulatory protein MerR; KEGG: amt:Amet_0478 putative transcriptional regulator, MerR family. | PFAM: heat shock protein DnaJ domain protein; KEGG: cbf:CLI_0254 molecular chaperone, DnaJ family. | 0.457 |
Cphy_1613 | Cphy_0628 | Cphy_1613 | Cphy_0628 | PFAM: regulatory protein MerR; KEGG: amt:Amet_0478 putative transcriptional regulator, MerR family. | KEGG: csc:Csac_1211 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp. | 0.440 |
Cphy_1613 | Cphy_2171 | Cphy_1613 | Cphy_2171 | PFAM: regulatory protein MerR; KEGG: amt:Amet_0478 putative transcriptional regulator, MerR family. | PFAM: heat shock protein DnaJ domain protein. | 0.457 |
Cphy_1613 | dnaJ | Cphy_1613 | Cphy_2310 | PFAM: regulatory protein MerR; KEGG: amt:Amet_0478 putative transcriptional regulator, MerR family. | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.457 |
Cphy_2171 | Cphy_1613 | Cphy_2171 | Cphy_1613 | PFAM: heat shock protein DnaJ domain protein. | PFAM: regulatory protein MerR; KEGG: amt:Amet_0478 putative transcriptional regulator, MerR family. | 0.457 |
dnaJ | Cphy_1613 | Cphy_2310 | Cphy_1613 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | PFAM: regulatory protein MerR; KEGG: amt:Amet_0478 putative transcriptional regulator, MerR family. | 0.457 |