Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cphy_1743PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Acetoacetate decarboxylase; KEGG: cac:CAC1044 NADH:flavin oxidoreductase, possible NADH oxidase. (937 aa)    
Predicted Functional Partners:
Cphy_1315
PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: cbe:Cbei_0310 electron transfer flavoprotein, alpha/beta-subunit-like protein.
  
 
 0.924
Cphy_0830
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: dsy:DSY1195 hypothetical protein.
  
 0.916
Cphy_1674
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: tde:TDE2369 hypothetical protein.
  
 0.916
Cphy_1316
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: cbe:Cbei_0311 electron transfer flavoprotein, alpha subunit-like protein.
  
 
 0.915
Cphy_1742
Transcriptional regulator, CdaR; KEGG: cac:CA_P0121 Leu-rich protein family protein, YaeG (E.coli) homolog.
 
   
 0.911
Cphy_3834
PFAM: Citrate synthase; KEGG: cth:Cthe_3027 citrate (Si)-synthase.
  
 0.871
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
 
 0.870
Cphy_1744
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: drm:Dred_3003 short-chain dehydrogenase/reductase SDR.
 
 
 0.824
Cphy_0118
KEGG: cbe:Cbei_2871 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase.
 
 
 0.818
Cphy_1514
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tte:TTE2131 NADH:flavin oxidoreductase, Old Yellow enzyme family.
 
 
0.815
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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