STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_1752PFAM: aldo/keto reductase; KEGG: cbf:CLI_3545 oxidoreductase, aldo/keto reductase family. (281 aa)    
Predicted Functional Partners:
Cphy_3258
PFAM: dihydropteroate synthase DHPS; homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: cth:Cthe_0645 homocysteine S-methyltransferase.
  
 0.895
Cphy_1743
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Acetoacetate decarboxylase; KEGG: cac:CAC1044 NADH:flavin oxidoreductase, possible NADH oxidase.
  
 
 0.682
Cphy_2027
PFAM: aldo/keto reductase; KEGG: sen:SACE_0624 oxidoreductase, aldo/keto reductase family.
 
 
 0.668
Cphy_1751
PFAM: NADPH-dependent FMN reductase; KEGG: cbf:CLI_3546 putative NADPH-dependent FMN reductase.
  
    0.611
Cphy_1049
PFAM: aldo/keto reductase; KEGG: ava:Ava_4145 aldo/keto reductase.
 
 
0.580
Cphy_2359
PFAM: DivIVA family protein; KEGG: csc:Csac_1911 DivIVA family protein.
   
  
 0.540
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.516
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.516
Cphy_2657
PFAM: aldo/keto reductase; KEGG: cbe:Cbei_3974 aldo/keto reductase.
  
 
 0.514
Cphy_3925
PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase_; KEGG: cth:Cthe_0423 iron-containing alcohol dehydrogenase.
  
 
 0.477
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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