STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Coexpression
Experiments
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[Homology]
Score
Cphy_1863PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ckl:CKL_2305 hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (141 aa)    
Predicted Functional Partners:
Cphy_2623
PFAM: phosphatidate cytidylyltransferase; KEGG: cth:Cthe_1000 phosphatidate cytidylyltransferase; Belongs to the CDS family.
  
 
 0.916
Cphy_1960
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cac:CAC0798 phosphatidylserine synthase.
  
 
 0.915
Cphy_1608
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: amt:Amet_1400 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
  0.900
Cphy_2454
TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cpr:CPR_1646 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
  0.900
nnrD
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
  
  
 0.548
folD
Methylenetetrahydrofolate dehydrogenase (NADP(+)); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
  
  
 0.523
Cphy_2063
Hypothetical protein; KEGG: aau:AAur_2329 putative ABC transporter, integral membrane protein.
  
     0.483
Cphy_2039
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; KEGG: dsy:DSY0175 hypothetical protein.
  
     0.479
Cphy_2453
PFAM: CinA domain protein; KEGG: tte:TTE1375 predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA.
  
  
 0.478
Cphy_2236
PFAM: Abortive infection protein; KEGG: dsy:DSY1578 hypothetical protein.
  
     0.470
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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