STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_1881PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: efa:EF1343 sugar ABC transporter, permease protein. (426 aa)    
Predicted Functional Partners:
Cphy_1880
Fructose-bisphosphate aldolase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: efa:EF1344 sugar ABC transporter, permease protein.
 
 0.995
Cphy_1879
PFAM: extracellular solute-binding protein family 1; KEGG: cdi:DIP0534 putative sugar-binding secreted protein.
 
 0.994
Cphy_2347
PFAM: extracellular solute-binding protein family 1; KEGG: cdi:DIP0534 putative sugar-binding secreted protein.
 
 0.990
Cphy_2308
PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA3175 maltose-binding periplasmic protein.
 
 0.988
Cphy_3611
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: cth:Cthe_1862 ABC transporter related protein.
 
 0.981
Cphy_2307
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bca:BCE_4063 maltosaccharide ABC transporter, permease protein.
 
 0.978
Cphy_2346
Fructose-bisphosphate aldolase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: efa:EF1344 sugar ABC transporter, permease protein.
 
 0.978
Cphy_2306
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: btl:BALH_3631 maltosaccharide ABC transporter, permease.
  
  
 
0.912
Cphy_2345
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: efa:EF1343 sugar ABC transporter, permease protein.
  
  
 
0.903
Cphy_2144
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: tde:TDE0182 ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.823
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.