Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cphy_2110Transcriptional regulator, CdaR; PFAM: sugar diacid recognition domain protein; KEGG: btk:BT9727_1189 transcriptional regulator; possible carbohydrate diacid regulator. (386 aa)    
Predicted Functional Partners:
Cphy_2104
PFAM: Gluconate transporter; Citrate transporter; KEGG: tde:TDE0207 permease, GntP family.
 
   
 0.612
Cphy_1208
PFAM: O-antigen polymerase; KEGG: bca:BCE_5389 O-antigen polymerase (wzy).
  
     0.571
Cphy_2029
Hypothetical protein; KEGG: amt:Amet_3803 copper amine oxidase domain protein.
  
     0.566
Cphy_0804
KEGG: mac:MA3471 hypothetical protein.
  
     0.523
Cphy_3570
Hypothetical protein; KEGG: bcl:ABC1144 sugar ABC transporter substrate-binding protein.
  
     0.511
Cphy_0805
PFAM: extracellular solute-binding protein family 5; KEGG: bcy:Bcer98_0219 extracellular solute-binding protein family 5.
  
     0.506
Cphy_2899
Hypothetical protein; KEGG: oih:OB2135 putative ABC-2 type transport system permease protein.
  
    0.503
Cphy_1970
KEGG: bra:BRADO1315 hypothetical protein; putative signal peptide.
  
     0.480
Cphy_1207
KEGG: pdi:BDI_0432 putative hexapeptide transferase family protein.
  
     0.473
Cphy_1943
Chitinase; PFAM: glycoside hydrolase family 19; KEGG: ath:AT1G02360 chitinase, putative.
  
     0.469
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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