STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_2202PFAM: phosphopantetheine-binding; KEGG: ckl:CKL_1730 polyketide synthase-related protein. (107 aa)    
Predicted Functional Partners:
Cphy_0516
TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: cth:Cthe_0935 malonyl CoA-acyl carrier protein transacylase.
  
 0.999
Cphy_1699
Phosphopantetheine-binding; PFAM: condensation domain protein; phosphopantetheine-binding; KEGG: bbt:BBta_1089 putative non-ribosomal peptide synthase.
 
 
 0.994
Cphy_3516
KEGG: csc:Csac_0698 hypothetical protein.
  
 0.992
Cphy_1733
KEGG: cth:Cthe_3021 Ech hydrogenase, subunit EchD, putative.
   
 0.988
Cphy_2911
PFAM: cytochrome P450; KEGG: cac:CAC3330 cytochrome P450 family protein, YBDT B.subtilis ortholog.
 
 0.982
Cphy_2999
PFAM: thioesterase superfamily protein; KEGG: smu:SMU.795 conserved hypothetical protein; probable esterase.
  
 
 0.981
Cphy_0231
PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: cno:NT01CX_1336 alginate O-acetylation protein; Belongs to the membrane-bound acyltransferase family.
  
 
 0.980
Cphy_0232
KEGG: ctc:CTC00591 hypothetical protein.
  
 
 0.980
Cphy_0518
3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 
 0.980
Cphy_3431
PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: cdf:CD2543 putative polysaccharide O-acetylase; Belongs to the membrane-bound acyltransferase family.
  
 
 0.980
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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