STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_2262N-acylglucosamine 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man). (393 aa)    
Predicted Functional Partners:
Cphy_2264
PFAM: glycosidase PH1107-related; KEGG: tma:TM1225 hypothetical protein.
 
   
 0.879
Cphy_1718
PFAM: glycosidase PH1107-related; KEGG: bfs:BF1316 hypothetical protein.
 
   
 0.771
Cphy_2263
Hypothetical protein; KEGG: cbh:CLC_2573 lipase/acylhydrolase, GDSL family.
 
     0.726
Cphy_2276
Mannan endo-1,4-beta-mannosidase; PFAM: glycoside hydrolase family 26; Carbohydrate binding family 6; KEGG: cth:Cthe_2811 glycoside hydrolase, family 26; Belongs to the glycosyl hydrolase 26 family.
 
   
 0.626
Cphy_1071
PFAM: glycoside hydrolase family 26; type 3a cellulose-binding domain protein; Carbohydrate binding family 6; KEGG: chu:CHU_0353 CHU large protein; candidate b-mannanase, glycoside hydrolase family 26 protein; Belongs to the glycosyl hydrolase 26 family.
 
   
 0.623
Cphy_2658
PFAM: protein of unknown function DUF303 acetylesterase putative; glycoside hydrolase family 2 sugar binding; KEGG: csc:Csac_0206 protein of unknown function DUF303, acetylesterase putative.
 
     0.535
Cphy_3210
KEGG: bha:BH2111 putative multiple sugar transport system substrate-binding protein.
 
     0.520
Cphy_2652
PFAM: AraC protein arabinose-binding/dimerisation; KEGG: cbe:Cbei_4840 helix-turn-helix-domain containing protein, AraC type.
  
     0.497
Cphy_1140
PFAM: lipolytic protein G-D-S-L family; KEGG: cth:Cthe_0797 glycoside hydrolase, family 5.
 
     0.482
Cphy_3207
PFAM: glycoside hydrolase family 8; KEGG: bha:BH2105 xylanase Y.
  
     0.480
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.