rpsT protein (Lachnoclostridium phytofermentans)

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rpsT

Ribosomal protein S20; Binds directly to 16S ribosomal RNA. (87 aa)

Predicted Functional Partners:

rpmF

0.994

rplU

0.994

rpsP

0.993

rpsO

0.993

rpmB

0.993

rpsI

0.993

rplM

0.993

rpmE

0.992

rpmA

0.990

rpsU

0.990

Your Current Organism:

Lachnoclostridium phytofermentans

NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplU	Cphy_3628	Cphy_2551	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.994
rplM	rpmA	Cphy_3628	Cphy_2549	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein L27; KEGG: cpr:CPR_2095 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.996
rplM	rpmB	Cphy_3628	Cphy_2893	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein L28; KEGG: swo:Swol_0757 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.992
rplM	rpmE	Cphy_3628	Cphy_0411	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L31; Binds the 23S rRNA.	0.983
rplM	rpmF	Cphy_3628	Cphy_1329	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: chy:CHY_1453 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.991
rplM	rpsI	Cphy_3628	Cphy_3627	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S9; KEGG: ctc:CTC02571 SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsO	Cphy_3628	Cphy_2767	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.994
rplM	rpsP	Cphy_3628	Cphy_2408	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S16; KEGG: cno:NT01CX_2212 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.994
rplM	rpsT	Cphy_3628	Cphy_2318	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.993
rplM	rpsU	Cphy_3628	Cphy_2616	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S21; KEGG: cpr:CPR_1995 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.987
rplU	rplM	Cphy_2551	Cphy_3628	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.994
rplU	rpmA	Cphy_2551	Cphy_2549	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein L27; KEGG: cpr:CPR_2095 ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplU	rpmB	Cphy_2551	Cphy_2893	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein L28; KEGG: swo:Swol_0757 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.992
rplU	rpmE	Cphy_2551	Cphy_0411	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein L31; Binds the 23S rRNA.	0.987
rplU	rpmF	Cphy_2551	Cphy_1329	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: chy:CHY_1453 ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.996
rplU	rpsI	Cphy_2551	Cphy_3627	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein S9; KEGG: ctc:CTC02571 SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.994
rplU	rpsO	Cphy_2551	Cphy_2767	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.993
rplU	rpsP	Cphy_2551	Cphy_2408	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein S16; KEGG: cno:NT01CX_2212 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.992
rplU	rpsT	Cphy_2551	Cphy_2318	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.994
rplU	rpsU	Cphy_2551	Cphy_2616	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	PFAM: ribosomal protein S21; KEGG: cpr:CPR_1995 ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.988