Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Cphy_2327PFAM: thioesterase superfamily protein; KEGG: bha:BH0798 acyl-CoA hydrolase. (164 aa)    
Predicted Functional Partners:
Cphy_1504
PFAM: protein of unknown function DUF1576; KEGG: amt:Amet_4320 protein of unknown function DUF1576.
 
      0.604
Cphy_1306
KEGG: cbf:CLI_0627 hypothetical protein.
 
  
 0.566
Cphy_2326
Hypothetical protein.
       0.552
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
    0.515
fabZ
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
  
  
 0.470
rsgA
Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
   
    0.441
Cphy_1463
PFAM: GTPase EngC; KEGG: cdf:CD3368A hypothetical protein; Belongs to the TRAFAC class YlqF/YawG GTPase family.
   
    0.441
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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