Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_2343TIGRFAM: glycogen debranching enzyme; PFAM: Amylo-alpha-16-glucosidase; KEGG: vfi:VF2048 amylo-1,6-glucosidase. (651 aa)    
Predicted Functional Partners:
Cphy_2348
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.890
Cphy_2331
Pullulanase, type I; KEGG: cpe:CPE1552 pullulanase; TIGRFAM: pullulanase, type I; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
   
 0.612
Cphy_1720
PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; Glycoside hydrolase family 38 central region; KEGG: gka:GK1902 alpha-D-mannosidase.
  
    0.504
Cphy_2344
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: llm:llmg_0743 alpha-amylase.
   
 
 0.472
Cphy_2342
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cbe:Cbei_0735 alpha amylase, catalytic region.
   
 
 0.468
Cphy_2813
PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_C1281 putative glycosyl transferase.
 
 
 0.465
Cphy_2304
KEGG: cbe:Cbei_4135 pullulanase, type I; TIGRFAM: pullulanase, type I; PFAM: glycoside hydrolase family 13 domain protein; pullanase-associated protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
   
 0.436
Cphy_3479
TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; KEGG: fnu:FN0806 SpoIID homolog.
  
     0.417
Cphy_2345
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: efa:EF1343 sugar ABC transporter, permease protein.
 
     0.409
Cphy_2347
PFAM: extracellular solute-binding protein family 1; KEGG: cdi:DIP0534 putative sugar-binding secreted protein.
 
   
 0.408
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.