Cphy_2365 protein (Lachnoclostridium phytofermentans)

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Cphy_2365

KEGG: amt:Amet_3681 hypothetical protein. (154 aa)

Predicted Functional Partners:

Cphy_0002

0.923

Cphy_3756

0.780

Cphy_0105

0.709

mgsA

0.683

Cphy_2368

0.662

Cphy_0106

0.650

Cphy_2366

0.615

recF

0.553

Cphy_0223

0.552

rnpA

0.552

Your Current Organism:

Lachnoclostridium phytofermentans

NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cphy_0002	Cphy_0105	Cphy_0002	Cphy_0105	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	SMART: AAA ATPase; KEGG: cno:NT01CX_0917 DNA replication protein DnaC, putative; Belongs to the DnaA family.	0.488
Cphy_0002	Cphy_0106	Cphy_0002	Cphy_0106	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: tte:TTE2692 hypothetical protein.	0.530
Cphy_0002	Cphy_2365	Cphy_0002	Cphy_2365	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	KEGG: amt:Amet_3681 hypothetical protein.	0.923
Cphy_0002	Cphy_2368	Cphy_0002	Cphy_2368	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	PFAM: cell cycle protein; KEGG: cbf:CLI_0695 rod shape-determining protein RodA; Belongs to the SEDS family.	0.453
Cphy_0002	Cphy_3756	Cphy_0002	Cphy_3756	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.	0.657
Cphy_0002	recF	Cphy_0002	Cphy_0004	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.	0.883
Cphy_0002	rnpA	Cphy_0002	Cphy_3945	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.	0.702
Cphy_0105	Cphy_0002	Cphy_0105	Cphy_0002	SMART: AAA ATPase; KEGG: cno:NT01CX_0917 DNA replication protein DnaC, putative; Belongs to the DnaA family.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.488
Cphy_0105	Cphy_0106	Cphy_0105	Cphy_0106	SMART: AAA ATPase; KEGG: cno:NT01CX_0917 DNA replication protein DnaC, putative; Belongs to the DnaA family.	TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: tte:TTE2692 hypothetical protein.	0.944
Cphy_0105	Cphy_2365	Cphy_0105	Cphy_2365	SMART: AAA ATPase; KEGG: cno:NT01CX_0917 DNA replication protein DnaC, putative; Belongs to the DnaA family.	KEGG: amt:Amet_3681 hypothetical protein.	0.709
Cphy_0105	Cphy_3756	Cphy_0105	Cphy_3756	SMART: AAA ATPase; KEGG: cno:NT01CX_0917 DNA replication protein DnaC, putative; Belongs to the DnaA family.	Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.	0.858
Cphy_0106	Cphy_0002	Cphy_0106	Cphy_0002	TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: tte:TTE2692 hypothetical protein.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.530
Cphy_0106	Cphy_0105	Cphy_0106	Cphy_0105	TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: tte:TTE2692 hypothetical protein.	SMART: AAA ATPase; KEGG: cno:NT01CX_0917 DNA replication protein DnaC, putative; Belongs to the DnaA family.	0.944
Cphy_0106	Cphy_2365	Cphy_0106	Cphy_2365	TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: tte:TTE2692 hypothetical protein.	KEGG: amt:Amet_3681 hypothetical protein.	0.650
Cphy_0223	Cphy_2365	Cphy_0223	Cphy_2365	PFAM: protein of unknown function DUF1292; KEGG: amt:Amet_0705 protein of unknown function DUF1292.	KEGG: amt:Amet_3681 hypothetical protein.	0.552
Cphy_2365	Cphy_0002	Cphy_2365	Cphy_0002	KEGG: amt:Amet_3681 hypothetical protein.	DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.923
Cphy_2365	Cphy_0105	Cphy_2365	Cphy_0105	KEGG: amt:Amet_3681 hypothetical protein.	SMART: AAA ATPase; KEGG: cno:NT01CX_0917 DNA replication protein DnaC, putative; Belongs to the DnaA family.	0.709
Cphy_2365	Cphy_0106	Cphy_2365	Cphy_0106	KEGG: amt:Amet_3681 hypothetical protein.	TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: tte:TTE2692 hypothetical protein.	0.650
Cphy_2365	Cphy_0223	Cphy_2365	Cphy_0223	KEGG: amt:Amet_3681 hypothetical protein.	PFAM: protein of unknown function DUF1292; KEGG: amt:Amet_0705 protein of unknown function DUF1292.	0.552
Cphy_2365	Cphy_2366	Cphy_2365	Cphy_2366	KEGG: amt:Amet_3681 hypothetical protein.	Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: tte:TTE0925 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.	0.615