Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cphy_2366Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: tte:TTE0925 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (342 aa)    
Predicted Functional Partners:
Cphy_2368
PFAM: cell cycle protein; KEGG: cbf:CLI_0695 rod shape-determining protein RodA; Belongs to the SEDS family.
 
  
 0.798
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
       0.797
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
  
    0.727
Cphy_2370
TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cth:Cthe_0093 septum site-determining protein MinD.
  
    0.706
Cphy_2365
KEGG: amt:Amet_3681 hypothetical protein.
  
 
 0.615
minC
Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
       0.526
Cphy_3908
KEGG: bha:BH1574 spore maturation protein.
  
  
 0.507
Cphy_2372
PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: csc:Csac_1869 peptidoglycan glycosyltransferase.
  
  
 0.504
Cphy_3907
PFAM: nucleoside recognition domain protein; KEGG: cth:Cthe_2098 nucleoside recognition.
  
  
 0.499
Cphy_2373
KEGG: cth:Cthe_0090 hypothetical protein.
  
  
 0.443
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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