STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cphy_2372PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: csc:Csac_1869 peptidoglycan glycosyltransferase. (949 aa)    
Predicted Functional Partners:
Cphy_2374
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.971
Cphy_2373
KEGG: cth:Cthe_0090 hypothetical protein.
 
  
 0.955
Cphy_2368
PFAM: cell cycle protein; KEGG: cbf:CLI_0695 rod shape-determining protein RodA; Belongs to the SEDS family.
 
 
 0.943
Cphy_2472
KEGG: cbh:CLC_1498 cell division protein FtsQ.
 
 
 0.939
Cphy_2375
PFAM: cell shape determining protein MreB/Mrl; KEGG: cbf:CLI_3056 rod shape-determining protein MreB.
 
 
 0.884
Cphy_2474
PFAM: cell cycle protein; KEGG: csc:Csac_0924 cell division protein FtsW; Belongs to the SEDS family.
 
 
 0.838
minC
Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
 
  
 0.807
Cphy_2363
Hypothetical protein; KEGG: tte:TTE1601 membrane-fusion protein.
 
  
 0.796
Cphy_3752
KEGG: cth:Cthe_0085 negative regulator of genetic competence.
  
  
 0.763
Cphy_0052
Hypothetical protein.
  
     0.761
Your Current Organism:
Lachnoclostridium phytofermentans
NCBI taxonomy Id: 357809
Other names: Clostridium phytofermentans ISDg, L. phytofermentans ISDg, Lachnoclostridium phytofermentans ISDg
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.